Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1722

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1721: 10089 - K11483 HOS2 histone deacetylase HOS2, at 32428 to 34334 10089 mRNA_1722: 10090 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 34875 to 37390 10090

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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34,606 + 0.4
34,704 + 0.1
34,710 + 0.1
34,717 + -0.2
34,753 - 1.9
34,868 + 1.1
34,948 - 0.1
35,013 - 0.0
35,040 + -0.2
35,159 - 10090 mRNA_1722 0.11 1.4
35,168 + 10090 mRNA_1722 0.12 -0.2
35,466 + 10090 mRNA_1722 0.23 0.1
35,672 + 10090 mRNA_1722 0.32 -0.8
35,841 + 10090 mRNA_1722 0.38 0.4
36,014 + 10090 mRNA_1722 0.45 -0.5
36,174 - 10090 mRNA_1722 0.52 0.7
36,204 + 10090 mRNA_1722 0.53 0.5
36,285 + 10090 mRNA_1722 0.56 1.1
36,292 + 10090 mRNA_1722 0.56 0.9
36,324 + 10090 mRNA_1722 0.58 0.3
36,375 + 10090 mRNA_1722 0.60 0.2
36,465 + 10090 mRNA_1722 0.63 1.7
36,602 + 10090 mRNA_1722 0.69 0.4
36,611 + 10090 mRNA_1722 0.69 -1.1
36,720 - 10090 mRNA_1722 0.73 -0.4
36,746 + 10090 mRNA_1722 0.74 2.0
36,965 + 10090 mRNA_1722 0.83 0.2
37,032 - 10090 mRNA_1722 0.86 1.7
37,050 - 10090 mRNA_1722 0.86 1.6
37,145 + 2.2
37,166 + 0.9
37,194 - 2.5
37,194 + -0.2
37,356 + 0.4
37,457 + 0.7
37,470 + 3.2
37,473 + 2.0
37,476 + 0.6
37,481 + 0.2
37,501 + -0.0
37,595 + 1.4
37,628 + -0.7
37,631 + 0.2
37,660 + -1.3
37,703 - 1.5
37,717 - 0.2
37,735 - 0.5
37,831 - -0.1
37,837 + 0.1
37,921 - 0.5
37,933 - 1.1
37,934 + -2.0
37,934 + 0.0
37,938 + -1.2
37,950 - -0.4
37,951 + 1.9
37,984 - 0.5
38,063 + 0.8
38,063 - -0.2
38,074 - 1.4
38,075 - 0.5
38,083 + 2.2
38,091 - -0.1
38,140 - -0.1
38,248 - 0.2
38,249 - -1.9
38,366 + 0.4
38,384 + 0.9