Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1675

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1674: 10042 - K07297 ADIPOR adiponectin receptor, at 860201 to 862501 10042 mRNA_1675: 10043 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 863051 to 864755 10043 mRNA_1676: 10044 - SUPERFAMILY--SSF81383, at 865613 to 866688 10044

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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862,207 - 10042 mRNA_1674 0.87 -0.3
862,338 + 0.1
862,472 + -0.7
862,603 + 1.7
862,633 + -0.1
862,669 - 0.0
862,773 + -0.3
862,794 + -0.4
862,821 - -1.0
863,083 - -0.3
863,360 - 10043 mRNA_1675 0.18 2.1
863,467 - 10043 mRNA_1675 0.24 2.0
863,480 + 10043 mRNA_1675 0.25 1.2
864,094 - 10043 mRNA_1675 0.61 -0.1
864,123 + 10043 mRNA_1675 0.63 1.6
864,221 + 10043 mRNA_1675 0.69 -0.5
864,387 - 10043 mRNA_1675 0.78 0.1
864,544 + 10043 mRNA_1675 0.88 2.7
864,550 - 10043 mRNA_1675 0.88 -1.0
864,812 - -0.2
865,105 - 1.1
865,106 - -0.2
865,123 + 0.1
865,386 + 0.5
865,423 - -0.2
865,462 + 0.1
865,695 - 0.7