Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1573

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1572: 9940 - K02139 ATPeFF, ATP17 F-type H+-transporting ATPase subunit f, at 624173 to 624749 9940 mRNA_1573: 9941 - KOG2022 Nuclear transport receptor LGL2 (importin beta superfamily), at 625284 to 628967 9941 mRNA_1574: 9942 - K06867 K06867 uncharacterized protein, at 629129 to 634398 9942

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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624,963 + -0.1
625,079 - -0.6
625,265 - -0.1
625,355 + -1.7
625,376 + 1.0
625,393 + -0.8
625,715 - 9941 mRNA_1573 0.12 -0.3
625,808 - 9941 mRNA_1573 0.14 -0.4
626,092 - 9941 mRNA_1573 0.22 -1.6
626,253 + 9941 mRNA_1573 0.26 2.2
626,872 + 9941 mRNA_1573 0.43 0.4
626,874 - 9941 mRNA_1573 0.43 -0.2
628,110 + 9941 mRNA_1573 0.77 0.8
628,710 - -0.1
629,028 + 0.2