Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1566

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1565: 9933 - KOG1860 Nuclear protein export factor, at 604614 to 609512 9933 mRNA_1566: 9934 - Hypothetical Protein, at 610347 to 612663 9934 mRNA_1567: 9935 - KOG4129 Exopolyphosphatases and related proteins, at 612854 to 615039 9935

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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609,600 + 0.8
609,605 - 0.4
609,606 - -0.3
609,611 + 0.1
609,612 + 2.0
609,613 - 0.2
609,619 - -0.7
609,770 - -0.0
609,782 + -1.1
609,788 - 2.1
609,806 - -0.5
609,907 - 0.5
609,918 + 0.0
609,936 - -1.0
609,946 + 0.2
609,948 + -1.1
609,968 + 0.3
610,067 + -3.3
610,069 - -0.6
610,075 - 2.1
610,083 + -1.1
610,227 + 2.2
610,264 + -0.1
610,265 + 1.0
610,375 - -0.4
610,376 + -0.3
610,531 + -0.4
611,366 - 9934 mRNA_1566 0.44 0.9
611,396 + 9934 mRNA_1566 0.45 -0.3
611,398 - 9934 mRNA_1566 0.45 -1.2
611,408 + 9934 mRNA_1566 0.46 0.9
611,644 + 9934 mRNA_1566 0.56 0.8
612,380 + 9934 mRNA_1566 0.88 -0.8
612,560 + 0.4
612,707 + -0.5
612,753 - -0.0
613,277 - 9935 mRNA_1567 0.19 0.2
613,301 - 9935 mRNA_1567 0.20 -0.4