Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1551

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1551: 9919 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 571932 to 573047 9919 mRNA_1552: 9920 - K03115 CSNK2B casein kinase II subunit beta, at 573433 to 575580 9920

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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570,946 + 1.6
571,044 - -0.9
571,191 - -1.1
571,212 + -0.3
571,239 + 0.9
571,343 - -1.4
571,468 + -1.8
571,491 - 2.4
571,510 - 0.9
571,516 + -1.8
571,525 - 0.1
571,536 + 0.3
571,561 - -0.3
571,591 + 0.3
571,619 - 1.6
571,643 - -0.6
571,646 - -1.4
571,655 + -0.0
571,674 + -0.1
571,676 + 0.1
571,711 + -0.4
571,809 - 0.1
571,816 - 0.6
571,818 - 0.4
571,956 + -0.5
571,960 - -0.8
572,105 + 9919 mRNA_1551 0.16 -0.0
572,306 - 9919 mRNA_1551 0.34 0.3
572,346 - 9919 mRNA_1551 0.37 0.7
572,547 + 9919 mRNA_1551 0.55 0.0
572,564 - 9919 mRNA_1551 0.57 -0.7
572,685 + 9919 mRNA_1551 0.67 0.1
572,882 - 9919 mRNA_1551 0.85 0.1
572,899 + 9919 mRNA_1551 0.87 0.5
573,586 + 0.2
573,648 + 9920 mRNA_1552 0.10 -0.0
573,680 - 9920 mRNA_1552 0.11 1.5
573,988 - 9920 mRNA_1552 0.26 -0.3