Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1511

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1510: 9878 - KOG2695 WD40 repeat protein, at 476183 to 478334 9878 mRNA_1511: 9879 - KOG2136 Transcriptional regulators binding to the GC-rich sequences, at 478426 to 481591 9879 mRNA_1512: 9880 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 481811 to 485314 9880

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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477,475 + 9878 mRNA_1510 0.60 0.0
477,778 + 9878 mRNA_1510 0.74 -0.4
478,353 - 0.1
479,950 + 9879 mRNA_1511 0.48 0.2
480,386 + 9879 mRNA_1511 0.62 -1.7
481,461 - 0.3
481,703 - -0.9
482,238 - 9880 mRNA_1512 0.12 -2.9
482,265 - 9880 mRNA_1512 0.13 -0.1
482,298 + 9880 mRNA_1512 0.14 -1.5
482,584 - 9880 mRNA_1512 0.22 0.5