Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1503

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1502: 9870 - HMMPfam-Fungal specific transcription factor domain-PF04082,SUPERFAMILY--SSF57701, at 460348 to 464473 9870 mRNA_1503: 9871 - Hypothetical Protein, at 464833 to 466128 9871 mRNA_1504: 9872 - K11251 H2A histone H2A, at 466293 to 467391 9872

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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463,974 + 9870 mRNA_1502 0.88 1.1
463,993 + 9870 mRNA_1502 0.88 0.2
464,261 - 1.0
464,337 - -0.5
464,370 - -0.3
464,440 - 1.6
464,445 + -0.4
464,543 - 1.1
464,746 + -2.8
464,984 + 9871 mRNA_1503 0.12 -0.7
465,020 - 9871 mRNA_1503 0.14 -1.1
465,415 - 9871 mRNA_1503 0.45 0.6
465,461 + 9871 mRNA_1503 0.48 0.9
465,845 + 9871 mRNA_1503 0.78 -0.2
465,903 + 9871 mRNA_1503 0.83 1.2
466,036 - 1.4
466,057 - -0.7
466,190 + -0.5
466,193 - 0.8
466,194 - 0.2
466,209 - -0.3
466,218 - 3.2
466,224 + 0.5
466,244 - 1.1
466,250 + -0.0
466,254 + -1.2