Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1438

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1438: 9806 - Hypothetical Protein, at 280347 to 281494 9806 mRNA_1439: 9807 - K03544 clpX, CLPX ATP-dependent Clp protease ATP-binding subunit ClpX, at 281812 to 284553 9807

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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279,427 - 0.5
279,457 + -0.0
279,607 + -0.3
279,617 + 0.7
279,763 + 1.2
279,768 + -1.0
280,325 - -0.2
280,611 - 9806 mRNA_1438 0.23 1.6
280,700 - 9806 mRNA_1438 0.31 1.1
280,901 + 9806 mRNA_1438 0.48 -1.1
280,917 + 9806 mRNA_1438 0.50 -0.3
281,024 - 9806 mRNA_1438 0.59 -0.9
281,048 - 9806 mRNA_1438 0.61 -0.8
281,084 + 9806 mRNA_1438 0.64 -0.1
281,231 + 9806 mRNA_1438 0.77 0.9
281,357 + 9806 mRNA_1438 0.88 -0.6
281,363 - 9806 mRNA_1438 0.89 -0.3
281,371 + 9806 mRNA_1438 0.89 -0.1
281,619 - -0.1
281,629 - 0.3
281,739 - 1.1
281,753 - 0.4
281,756 + 0.0
281,757 + -1.7
281,888 - 0.3
281,941 - -1.7
281,944 + -0.0
282,052 - 0.2
282,195 - 9807 mRNA_1439 0.14 -0.1