Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1428

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1427: 9795 - Hypothetical Protein, at 258991 to 261200 9795 mRNA_1428: 9796 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 261983 to 262469 9796 mRNA_1429: 9797 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 262714 to 263546 9797

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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261,164 + 2.8
261,314 - 0.3
261,333 - 1.6
261,380 + 0.5
261,534 - -1.5
261,793 + 0.6
262,035 - 9796 mRNA_1428 0.11 -1.0
262,658 + -0.8
262,929 - 9797 mRNA_1429 0.26 0.9
263,102 + 9797 mRNA_1429 0.47 1.1
263,287 - 9797 mRNA_1429 0.69 -0.6