Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1401

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1400: 9768 - K20360 TBC1D22, GYP1 TBC1 domain family member 2, at 181487 to 184184 9768 mRNA_1401: 9769 - Hypothetical Protein, at 184306 to 185166 9769 mRNA_1402: 9770 - K06654 PHO80 phosphate system cyclin PHO80, at 185630 to 187322 9770

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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184,261 + -2.1
184,270 - 0.8
184,320 - 2.1
184,333 + 0.6
184,445 + 9769 mRNA_1401 0.16 0.2
184,453 + 9769 mRNA_1401 0.17 0.9
184,459 - 9769 mRNA_1401 0.18 -2.0
184,459 - 9769 mRNA_1401 0.18 0.1
185,488 + -1.2
185,591 - 2.1
185,900 + 9770 mRNA_1402 0.16 -0.4
185,935 - 9770 mRNA_1402 0.18 1.2