Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1385

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1384: 9752 - KOG4472 Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase), at 143801 to 145438 9752 mRNA_1385: 9753 - K06966 K06966 uncharacterized protein, at 145892 to 146941 9753 mRNA_1386: 9754 - K06966 K06966 uncharacterized protein, at 147599 to 148550 9754

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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145,281 - -2.2
145,344 + -1.2
145,463 + -0.3
145,587 + -0.9
145,601 - 0.6
145,605 - 0.2
145,609 + -1.5
145,744 + -1.8
145,748 - -0.4
145,769 + -0.2
145,887 - 0.6
145,896 + 0.8
146,026 - 9753 mRNA_1385 0.13 1.3
146,077 - 9753 mRNA_1385 0.18 -0.9
146,475 - 9753 mRNA_1385 0.56 0.4
146,618 - 9753 mRNA_1385 0.69 0.4
146,748 - 9753 mRNA_1385 0.82 -0.4
146,924 - 0.6
146,958 + -0.3
147,043 - -1.0
147,053 - -0.9
147,074 + -1.4
147,512 - 0.3
147,657 - -0.7
147,674 + 0.7