Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1384

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1383: 9751 - HMMPfam-Nse4 C-terminal-PF08743,HMMPfam-Binding domain of Nse4/EID3 to Nse3-MAGE-PF15412, at 142015 to 143615 9751 mRNA_1384: 9752 - KOG4472 Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase), at 143801 to 145438 9752 mRNA_1385: 9753 - K06966 K06966 uncharacterized protein, at 145892 to 146941 9753

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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144,137 + 9752 mRNA_1384 0.21 0.0
144,145 + 9752 mRNA_1384 0.21 -1.3
144,283 + 9752 mRNA_1384 0.29 -2.3
144,427 + 9752 mRNA_1384 0.38 1.0
144,491 - 9752 mRNA_1384 0.42 1.7
144,730 - 9752 mRNA_1384 0.57 0.3
144,877 + 9752 mRNA_1384 0.66 -0.2
145,281 - -2.2
145,344 + -1.2
145,463 + -0.3
145,587 + -0.9
145,601 - 0.6
145,605 - 0.2
145,609 + -1.5
145,744 + -1.8
145,748 - -0.4
145,769 + -0.2
145,887 - 0.6
145,896 + 0.8
146,026 - 9753 mRNA_1385 0.13 1.3
146,077 - 9753 mRNA_1385 0.18 -0.9