Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1371

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1370: 9738 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 112389 to 113571 9738 mRNA_1371: 9739 - KOG3024 Uncharacterized conserved protein, at 114058 to 115447 9739 mRNA_1372: 9740 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 115782 to 116339 9740

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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113,065 + 9738 mRNA_1370 0.57 0.8
113,072 - 9738 mRNA_1370 0.58 -0.1
113,181 - 9738 mRNA_1370 0.67 1.1
113,369 + 9738 mRNA_1370 0.83 0.2
113,492 + -4.2
113,508 + 0.0
113,631 - -0.0
113,636 - -0.4
113,637 - -0.6
113,744 - -0.7
113,944 + -1.9
113,945 - -1.8
113,949 - 1.0
114,220 - 9739 mRNA_1371 0.12 -1.3
114,248 + 9739 mRNA_1371 0.14 0.2
115,527 - 0.5
115,843 - 9740 mRNA_1372 0.11 -1.8
116,036 + 9740 mRNA_1372 0.46 0.4
116,187 + 9740 mRNA_1372 0.73 0.5
116,267 + 9740 mRNA_1372 0.87 -0.2
116,419 - -0.7
116,420 + -0.8