Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1355

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1354: 9722 - Hypothetical Protein, at 69556 to 71202 9722 mRNA_1355: 9723 - SUPERFAMILY--SSF50685, at 72198 to 73021 9723

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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71,234 - -0.8
71,301 + -1.4
71,420 - 2.2
71,423 + 2.4
71,448 - -0.9
71,556 + 0.4
71,591 + 0.9
71,612 - -1.2
71,721 + 0.8
71,735 - -0.2
71,873 + -0.4
72,058 + 0.8
72,155 + -0.9
72,158 + 0.6
72,321 - 9723 mRNA_1355 0.15 0.9
72,431 - 9723 mRNA_1355 0.28 0.4
72,446 - 9723 mRNA_1355 0.30 4.1
72,454 + 9723 mRNA_1355 0.31 0.5
72,464 - 9723 mRNA_1355 0.32 0.5
72,639 - 9723 mRNA_1355 0.54 1.1
72,704 - 9723 mRNA_1355 0.61 0.5
72,748 - 9723 mRNA_1355 0.67 -0.3
72,751 + 9723 mRNA_1355 0.67 1.0
72,881 - 9723 mRNA_1355 0.83 0.3
72,893 - 9723 mRNA_1355 0.84 -0.7
73,030 + 0.6
73,060 + 0.1
73,062 - 0.9
73,269 - -0.2
73,297 - -1.1
73,306 - -1.4
73,308 - 0.0
73,310 - -0.2
73,314 - 0.6
73,337 - 0.5
73,338 + -1.3
73,343 - 0.4
73,345 - 1.7
73,352 - -0.5
73,353 + 0.6
73,359 - 0.1
73,360 - 1.6
73,368 + 0.2
73,459 + 1.0
73,493 - -0.1
73,498 + -0.9
73,506 - -1.0
73,521 - 0.3
73,558 - -1.5
73,591 + 1.5
73,601 - 0.3
73,630 - 0.5
73,631 - 0.9
73,647 - 1.6
73,649 - 0.2
73,654 + -1.9
73,662 - -0.7
73,663 + 0.2
73,666 - 1.3
73,668 + -0.3
73,747 - -0.9
73,794 + 2.0
73,840 + 1.0
73,846 + -0.2
73,850 - 1.7
73,850 + 1.1
73,867 - 0.5
73,869 - 0.4
73,869 - -1.8
73,877 - 1.1
73,901 - -0.0
73,926 - -0.2
73,949 - -0.4
74,007 - -1.8