Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1309

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1308: 9676 - KOG0342 ATP-dependent RNA helicase pitchoune, at 890462 to 892850 9676 mRNA_1309: 9677 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 893603 to 895450 9677 mRNA_1310: 9678 - KOG3022 Predicted ATPase, nucleotide-binding, at 895726 to 897428 9678

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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893,096 - 0.8
893,132 + 1.3
894,740 - 9677 mRNA_1309 0.62 -0.1
895,155 + 9677 mRNA_1309 0.84 0.3
895,304 - -0.2
895,314 - -0.2
895,322 + -1.2
895,325 - -0.0
895,423 + 1.9
895,491 - 0.7
895,494 - -1.0
895,608 + -0.5
895,610 - 0.2
895,612 + -1.2
895,613 + 0.0
895,643 + -0.6
895,647 + 1.4
895,678 + -0.1
895,695 + 1.2
895,724 - 0.3