Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1306

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1306: 9674 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 881948 to 882184 9674

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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880,962 - -1.2
880,975 - -0.3
881,000 - -0.1
881,139 - 1.5
881,139 - 2.0
881,148 + -0.6
881,259 + -0.1
881,261 - -0.1
881,272 - 1.1
881,311 + -0.8
881,313 + -3.2
881,418 - -3.7
881,420 - -0.1
881,432 + 0.5
881,437 + -0.7
881,450 - 0.7
881,452 - -1.7
881,460 + 1.1
881,547 + -0.6
881,900 + -0.6
882,013 + 9674 mRNA_1306 0.27 0.4
882,013 + 9674 mRNA_1306 0.27 0.7
882,042 + 9674 mRNA_1306 0.40 1.6
882,187 - 0.3
882,192 + 0.6
882,247 - 1.7
882,338 - -0.8
882,344 + -0.3
882,349 + 1.3
882,355 - 0.6
882,357 + -1.4
882,369 + 0.8
882,379 + -0.9
882,386 - -0.1
882,387 - -0.9
882,387 - -0.8
882,387 - 0.6
882,391 + 0.1
882,392 + -1.9
882,405 - 1.9
882,413 - -2.6
882,532 - 0.3
882,549 - 0.6
882,693 + 1.2
882,830 - 0.5
882,915 + 2.6
882,918 + -0.7
882,957 - -0.1
882,959 - -1.2
883,096 + -0.5