Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1294

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1293: 9661 - Hypothetical Protein, at 850858 to 851999 9661 mRNA_1294: 9662 - K20369 ERV29, SURF4 ER-derived vesicles protein, at 852831 to 853984 9662

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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851,859 - 9661 mRNA_1293 0.88 -0.2
851,863 - 9661 mRNA_1293 0.88 -0.8
851,882 - 9661 mRNA_1293 0.90 -0.2
851,891 - 0.5
851,897 + -1.7
851,900 + 0.2
851,906 - 0.3
851,914 - 1.2
851,917 + 0.9
852,137 - -0.2
852,277 - 1.7
852,338 - 0.7
852,343 + -0.5
852,353 + 0.2
852,356 + -2.4
852,359 + 1.1
852,362 + 0.9
852,372 + -0.2
852,490 - 1.4
852,492 + 0.4
852,501 - -0.5
852,510 - 0.2
852,637 - 0.2
852,925 - -0.0
853,420 + 9662 mRNA_1294 0.51 -0.4
853,853 + 9662 mRNA_1294 0.89 -0.0
853,988 + -1.3
854,237 - 0.3
854,717 - -0.7