Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1279

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830 9646 mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265 9647

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
821,706 - -1.3
821,717 - -0.2
821,730 + 0.8
821,744 + -0.0
821,748 + 0.4
821,752 - -0.2
821,755 + -0.0
821,764 + 0.8
821,835 + -1.3
821,887 + -0.3
821,911 + 0.1
821,919 + 0.1
821,919 + 0.1
821,921 + 0.2
821,922 - -0.1
821,923 - -0.0
821,923 + 1.0
821,924 + -0.8
821,927 + 1.1
821,928 + -0.2
821,929 - -2.4
821,931 + 0.1
821,939 - 0.5
821,940 - -0.4
821,941 - -0.4
821,941 + 1.7
821,965 + 0.5
821,970 - 0.8
821,975 - 0.5
821,983 - 0.2
821,996 - 0.5
822,000 - 0.4
822,004 - 0.7
822,005 - 0.3
822,091 - 0.7
822,179 - -0.6
822,180 + 0.3
822,189 - -2.6
822,208 - 2.5
822,214 - -1.5
822,214 - 1.6
822,231 - 0.7
822,235 - -0.5
822,242 + -0.6
822,242 + -0.6
822,249 + 1.8
822,250 + 0.4
822,257 - -0.6
822,259 + 0.1
822,262 + -0.0
822,266 - 0.2
822,375 + -0.4
822,377 + 2.0
823,107 - 9647 mRNA_1279 0.29 -1.2
823,108 + 9647 mRNA_1279 0.29 1.2
823,119 + 9647 mRNA_1279 0.30 -0.4
823,440 - 9647 mRNA_1279 0.50 0.0
823,448 + 9647 mRNA_1279 0.50 0.4
823,697 - 9647 mRNA_1279 0.65 -0.7
823,735 + 9647 mRNA_1279 0.68 -0.3
824,015 + 9647 mRNA_1279 0.85 -2.4
824,386 - 0.9
824,792 - -1.0
824,796 + -1.2
824,800 + -0.1
824,821 + -1.1
824,821 + -0.3
824,866 + -0.0
824,874 - -1.6
824,874 + 0.7
824,894 + -1.4
825,013 + 3.0
825,046 - 0.3
825,053 + 0.6
825,054 - -0.0
825,095 - -0.2
825,116 - -0.1
825,141 + -0.6
825,141 + 0.2
825,178 - 1.4
825,184 - -1.5
825,190 + -0.5
825,191 - -1.6
825,193 - 1.0
825,198 + -1.4
825,200 - -0.1
825,206 + 1.6
825,211 + 1.2
825,211 + -0.7
825,224 - 0.8
825,241 - -0.0
825,243 + -0.9
825,244 - -0.5
825,245 - 1.0