Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1275

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1274: 9642 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 810580 to 813182 9642 mRNA_1275: 9643 - K11426 SMYD SET and MYND domain-containing protein, at 813494 to 815725 9643 mRNA_1276: 9644 - K01070 frmB, ESD, fghA S-formylglutathione hydrolase, at 815898 to 817599 9644

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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812,579 + 9642 mRNA_1274 0.77 -0.8
812,604 + 9642 mRNA_1274 0.78 0.6
812,687 - 9642 mRNA_1274 0.81 1.0
813,176 - 2.3
813,219 - 1.7
813,470 + 1.3
813,618 - -1.5
813,672 + 1.4
813,740 + 9643 mRNA_1275 0.11 0.0
813,804 + 9643 mRNA_1275 0.14 0.0
814,057 + 9643 mRNA_1275 0.25 -0.6
814,450 - 9643 mRNA_1275 0.43 -1.1
814,469 + 9643 mRNA_1275 0.44 -1.2
814,529 + 9643 mRNA_1275 0.46 0.7
814,532 + 9643 mRNA_1275 0.47 -0.0
814,572 - 9643 mRNA_1275 0.48 0.4
814,593 - 9643 mRNA_1275 0.49 -0.1
814,601 - 9643 mRNA_1275 0.50 0.3
814,670 + 9643 mRNA_1275 0.53 -1.0
815,057 + 9643 mRNA_1275 0.70 -0.7
815,061 + 9643 mRNA_1275 0.70 0.1
815,378 - 9643 mRNA_1275 0.84 0.7
815,490 - 9643 mRNA_1275 0.89 0.1
815,500 + 9643 mRNA_1275 0.90 1.5
815,519 + -1.4
815,755 - 0.3
815,790 + 0.3
815,793 - -0.3
815,806 + 0.5
816,101 + 9644 mRNA_1276 0.12 1.2
816,535 + 9644 mRNA_1276 0.37 2.3
816,554 + 9644 mRNA_1276 0.39 0.4