Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1196

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1195: 9563 - K03248 EIF3G translation initiation factor 3 subunit G, at 624077 to 625434 9563 mRNA_1196: 9564 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 626227 to 627477 9564

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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625,859 + 1.7
625,874 - 1.3
625,994 + -0.0
626,006 - -2.9
626,007 - -2.4
626,008 + 0.7
626,015 + 0.2
626,042 + 1.2
626,135 - -0.2
626,246 + 0.5
626,299 - -0.7
626,427 + 9564 mRNA_1196 0.16 -1.4
626,707 - 9564 mRNA_1196 0.38 1.1
626,729 + 9564 mRNA_1196 0.40 0.2
626,876 + 9564 mRNA_1196 0.52 -1.0
627,005 + 9564 mRNA_1196 0.62 -1.6
627,254 + 9564 mRNA_1196 0.82 1.2
627,453 - 2.2
627,786 - -1.6
627,872 + -0.1
627,987 + -0.8
628,004 + 0.3
628,200 + -0.4
628,266 + -0.4
628,314 - -0.9
628,325 - -0.7
628,326 + -0.8
628,328 - -0.4
628,332 - 0.0
628,344 - -0.2
628,432 - 0.0
628,448 - -2.1