Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1154

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1153: 9521 - K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase, at 524550 to 526104 9521 mRNA_1154: 9522 - Hypothetical Protein, at 526597 to 527643 9522 mRNA_1155: 9523 - ProSiteProfiles-CBS domain profile.-PS51371,SUPERFAMILY--SSF54631, at 528482 to 529504 9523

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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525,743 + 9521 mRNA_1153 0.77 1.4
525,769 + 9521 mRNA_1153 0.78 -0.8
526,021 - -3.0
526,177 + -1.1
526,446 + -0.8
526,479 - -1.1
526,481 + 1.5
526,508 + -0.9
526,509 - 1.0
526,605 - 1.6
526,761 + 9522 mRNA_1154 0.16 1.8
526,771 + 9522 mRNA_1154 0.17 -2.9
526,941 - 9522 mRNA_1154 0.33 1.3
526,952 + 9522 mRNA_1154 0.34 -1.4
526,954 - 9522 mRNA_1154 0.34 -1.5
527,218 + 9522 mRNA_1154 0.59 0.7
527,551 - -1.5
527,656 + 0.2
528,215 - -1.3
528,373 - -0.2
528,439 - -0.2
528,537 + -0.7