Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1145

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510566 to 511961 9512 mRNA_1145: 9513 - K00669 AANAT arylalkylamine N-acetyltransferase, at 512734 to 513942 9513 mRNA_1146: 9514 - K06682 TEM1 Gtp-binding protein of the ras superfamily involved in termination of M-phase, at 514392 to 515549 9514

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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511,917 + -0.6
511,961 - 1.2
512,074 + -3.0
512,088 + 0.2
512,095 + 1.2
512,226 + 0.9
512,228 + 0.6
512,356 - 0.8
512,392 + 0.1
512,396 + 1.6
512,427 + -1.0
512,429 - -0.1
512,431 + 0.2
512,529 + -0.7
512,815 + -2.1
513,390 - 9513 mRNA_1145 0.54 -2.7
513,597 - 9513 mRNA_1145 0.71 0.9
513,690 - 9513 mRNA_1145 0.79 -0.8
513,716 + 9513 mRNA_1145 0.81 0.5
513,986 - 1.1
514,131 + 1.2
514,134 - 0.1
514,675 + 9514 mRNA_1146 0.24 -2.1
514,721 - 9514 mRNA_1146 0.28 0.4
514,858 - 9514 mRNA_1146 0.40 -0.9
514,859 + 9514 mRNA_1146 0.40 -0.4
514,864 - 9514 mRNA_1146 0.41 -0.4
514,874 - 9514 mRNA_1146 0.42 0.2
514,895 - 9514 mRNA_1146 0.43 -2.1