Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1046

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1046: 9414 - K11346 ING4 inhibitor of growth protein 4, at 270342 to 271774 9414 mRNA_1047: 9415 - K19054 FXN frataxin, at 272188 to 272699 9415

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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270,206 - 0.9
270,211 + 0.3
270,216 + 0.2
270,227 + -0.2
270,229 + -1.0
270,357 + 1.6
270,377 + -0.4
270,508 + 9414 mRNA_1046 0.12 1.2
270,517 + 9414 mRNA_1046 0.12 1.1
270,611 + 9414 mRNA_1046 0.19 0.7
270,616 + 9414 mRNA_1046 0.19 1.3
270,643 - 9414 mRNA_1046 0.21 3.3
270,660 + 9414 mRNA_1046 0.22 -0.0
270,672 + 9414 mRNA_1046 0.23 1.3
271,079 + 9414 mRNA_1046 0.51 0.1
271,188 + 9414 mRNA_1046 0.59 -0.2
271,214 - 9414 mRNA_1046 0.61 -0.5
271,234 + 9414 mRNA_1046 0.62 0.2
271,240 + 9414 mRNA_1046 0.63 -1.4
271,279 - 9414 mRNA_1046 0.65 0.1
271,502 - 9414 mRNA_1046 0.81 -0.5
271,661 - 1.7
271,664 + 1.9
271,756 - -0.8
271,786 + 2.7
271,803 - -1.1
271,804 - -0.1
271,805 + -1.2
271,805 + -0.2
271,808 - -0.9
271,811 - 0.9
271,832 + -0.4