Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1015

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1014: 9382 - Hypothetical Protein, at 209891 to 213073 9382 mRNA_1015: 9383 - HMMPfam-Thioesterase superfamily-PF03061,SUPERFAMILY--SSF54637, at 213676 to 214574 9383 mRNA_1016: 9384 - K14833 NOC2 nucleolar complex protein 2, at 214946 to 217442 9384

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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212,679 + 9382 mRNA_1014 0.88 0.5
212,692 - 9382 mRNA_1014 0.88 1.9
212,828 - 1.4
212,862 - 0.7
212,956 - -0.4
213,311 - 1.1
213,319 - -1.0
213,455 - -1.5
213,506 + -0.5
213,553 - 0.4
213,553 - 0.4
213,573 + 2.3
213,980 - 9383 mRNA_1015 0.34 -1.6
214,159 - 9383 mRNA_1015 0.54 -0.9
214,184 - 9383 mRNA_1015 0.57 -1.1
214,197 + 9383 mRNA_1015 0.58 0.4
214,208 + 9383 mRNA_1015 0.59 -0.1
214,222 - 9383 mRNA_1015 0.61 0.2
214,333 - 9383 mRNA_1015 0.73 0.6
214,353 + 9383 mRNA_1015 0.75 0.2
214,453 + 9383 mRNA_1015 0.86 -1.1
214,466 + 9383 mRNA_1015 0.88 1.0
214,467 - 9383 mRNA_1015 0.88 1.0
214,474 - 9383 mRNA_1015 0.89 -0.9
214,597 - -1.5
214,600 + 1.4
214,600 + 1.5
214,611 + 1.2
214,611 - -2.3
214,622 - -0.1
214,627 + 0.0
214,636 - -1.2
214,754 + 0.9
214,760 - 1.1
214,765 - -0.1
214,767 - -1.6
214,786 - 1.0