Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1011

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1011: 9379 - Hypothetical Protein, at 203072 to 203287 9379 mRNA_1012: 9380 - Hypothetical Protein, at 203775 to 207320 9380

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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202,107 - -1.5
202,111 - -1.8
202,112 + 0.2
202,135 + -0.1
202,142 - -0.7
202,251 - 1.6
202,275 + -0.7
202,316 + -0.6
202,321 + 0.2
202,340 + 0.3
202,415 - -1.5
202,421 + 0.3
202,455 + -0.7
202,465 - -0.5
202,473 + -0.0
202,478 - 0.2
202,480 + -0.1
202,484 + 1.1
202,491 - -0.2
202,497 + -0.3
202,497 + 0.3
202,505 + 1.0
202,514 + 1.6
202,514 + -1.0
202,516 - 2.3
202,520 - -0.2
202,536 + -0.0
202,537 + -2.1
202,538 + -0.6
202,540 - -1.0
202,540 - -0.7
202,564 + -1.4
202,570 - -0.5
202,610 + -0.5
202,672 - 1.0
202,673 - 0.8
202,675 - 0.6
202,678 + 0.1
202,681 + 0.6
202,683 - -0.5
202,685 - -2.2
202,690 - 0.5
202,695 - 0.2
202,704 + -0.7
202,710 + 0.0
202,715 + -0.3
202,742 - 1.9
202,762 - 0.3
202,834 - 1.2
202,839 - 1.9
202,858 + 0.6
202,865 + 0.5
203,032 - -0.1
203,033 + 0.4
203,035 - 1.0
203,036 + -0.1
203,101 - 9379 mRNA_1011 0.13 -0.7
203,126 - 9379 mRNA_1011 0.25 -0.3
203,131 - 9379 mRNA_1011 0.27 -0.5
203,141 + 9379 mRNA_1011 0.32 0.1
203,152 + 9379 mRNA_1011 0.37 0.0
203,154 - 9379 mRNA_1011 0.38 -0.8
203,229 - 9379 mRNA_1011 0.73 0.6
203,285 + 1.7
203,299 + 0.1
203,306 + -1.2
203,310 + -0.2
203,312 - 2.4
203,314 - -0.3
203,315 + -0.9
203,370 - -0.8
203,415 + -1.5
203,421 + 0.5
203,702 - -0.6
203,837 + 0.1
203,890 - -1.6