Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1003

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1003: 9371 - HMMPfam-Protein of unknown function (DUF2841)-PF11001, at 179508 to 182769 9371

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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178,602 + 1.4
179,177 - 1.4
179,328 - -1.2
179,351 - 1.1
179,383 + -0.3
179,612 + -1.4
179,646 + 0.5
179,903 + 9371 mRNA_1003 0.12 -1.8
180,267 - 9371 mRNA_1003 0.23 0.8
180,571 - 9371 mRNA_1003 0.33 -0.5
180,849 + 9371 mRNA_1003 0.41 1.0
180,952 - 9371 mRNA_1003 0.44 0.5
180,985 + 9371 mRNA_1003 0.45 0.4
181,125 - 9371 mRNA_1003 0.50 0.6
181,232 + 9371 mRNA_1003 0.53 0.8
181,386 - 9371 mRNA_1003 0.58 1.4
181,465 + 9371 mRNA_1003 0.60 0.0
181,527 + 9371 mRNA_1003 0.62 -1.0
181,540 - 9371 mRNA_1003 0.62 -0.1
181,548 + 9371 mRNA_1003 0.63 -0.1
181,686 + 9371 mRNA_1003 0.67 -0.7
181,841 - 9371 mRNA_1003 0.72 0.1
182,151 - 9371 mRNA_1003 0.81 0.4
182,263 - 9371 mRNA_1003 0.84 -0.7
182,295 + 9371 mRNA_1003 0.85 -0.3
182,295 - 9371 mRNA_1003 0.85 -1.0
182,317 + 9371 mRNA_1003 0.86 0.6
182,319 + 9371 mRNA_1003 0.86 0.0
182,431 + 9371 mRNA_1003 0.90 0.5
182,716 + 1.0
183,007 - 0.6
183,017 - 0.0
183,152 - 0.0
183,162 + -0.6
183,177 + 1.4
183,295 + -0.9
183,349 - 0.4
183,351 - 1.5
183,354 - -1.1
183,356 - -0.5
183,358 + -2.1
183,365 + -1.4
183,367 - 0.7
183,367 - -0.1
183,367 - 0.0
183,367 - -0.8
183,369 + 0.7
183,369 - -0.5
183,373 + 0.2
183,382 + -0.5
183,384 + -0.6
183,404 + 0.1
183,498 + -1.1
183,515 - -0.7
183,520 - -1.5
183,537 - 0.7
183,679 - -1.2
183,702 - -0.9
183,702 - 1.5