Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_935

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_934: 9302 - K18726 FAF2, UBXD8 FAS-associated factor 2, at 12086 to 14306 9302 mRNA_935: 9303 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 14546 to 16225 9303 mRNA_936: 9304 - K10365 CAPZB capping protein (actin filament) muscle Z-line, beta, at 16670 to 18291 9304

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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13,678 + 9302 mRNA_934 0.72 -0.5
13,776 + 9302 mRNA_934 0.76 -1.4
14,083 - 9302 mRNA_934 0.90 -0.3
14,221 - 1.4
14,382 - -0.0
14,501 - 2.4
14,553 + 0.6
14,802 + 9303 mRNA_935 0.15 0.1
14,804 - 9303 mRNA_935 0.15 0.5
14,914 + 9303 mRNA_935 0.22 0.3
14,946 - 9303 mRNA_935 0.24 1.1
14,983 - 9303 mRNA_935 0.26 0.5
15,237 - 9303 mRNA_935 0.41 -0.5
15,245 - 9303 mRNA_935 0.42 -0.4
15,262 + 9303 mRNA_935 0.43 0.3
15,387 + 9303 mRNA_935 0.50 -1.5
15,394 + 9303 mRNA_935 0.50 1.2
15,520 - 9303 mRNA_935 0.58 -0.2
15,543 - 9303 mRNA_935 0.59 -1.8
15,545 + 9303 mRNA_935 0.59 -1.1
15,548 - 9303 mRNA_935 0.60 1.2
15,562 + 9303 mRNA_935 0.60 -0.3
15,566 + 9303 mRNA_935 0.61 0.5
15,587 + 9303 mRNA_935 0.62 -1.6
15,676 - 9303 mRNA_935 0.67 0.2
15,682 + 9303 mRNA_935 0.68 0.4
15,683 + 9303 mRNA_935 0.68 0.4
15,687 + 9303 mRNA_935 0.68 -0.1
15,689 + 9303 mRNA_935 0.68 1.3
15,813 - 9303 mRNA_935 0.75 -0.9
15,835 - 9303 mRNA_935 0.77 -0.5
15,955 - 9303 mRNA_935 0.84 1.6
16,063 - 0.2
16,110 - 1.3
16,143 + 0.2
16,233 + 2.6
16,275 - 0.1
16,309 - 1.0
16,338 - 0.8
16,448 - -0.5
16,455 + 1.4
16,457 - 0.0
16,467 + -0.0
16,473 - 2.7
16,551 + -0.9
16,603 + 0.9
16,699 + 0.2
16,699 + 0.1
16,746 + 0.4
16,801 + 0.6
17,057 + 9304 mRNA_936 0.24 -1.1
17,190 + 9304 mRNA_936 0.32 -0.5