Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_934

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_933: 9301 - HMMPfam-NDT80 / PhoG like DNA-binding family-PF05224,ProSiteProfiles-NDT80 DNA-binding domain profile.-PS51517,SUPERFAMILY--SSF49417, at 9624 to 11846 9301 mRNA_934: 9302 - K18726 FAF2, UBXD8 FAS-associated factor 2, at 12086 to 14306 9302 mRNA_935: 9303 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 14546 to 16225 9303

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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11,492 + 9301 mRNA_933 0.84 0.5
11,629 + 0.9
11,727 - 0.0
11,740 - -0.0
11,844 - -0.3
11,885 - -1.7
12,062 - -1.5
12,172 + 0.5
12,342 + 9302 mRNA_934 0.12 0.2
13,054 + 9302 mRNA_934 0.44 -0.1
13,191 + 9302 mRNA_934 0.50 -0.1
13,340 - 9302 mRNA_934 0.56 -0.1
13,678 + 9302 mRNA_934 0.72 -0.5
13,776 + 9302 mRNA_934 0.76 -1.4
14,083 - 9302 mRNA_934 0.90 -0.3
14,221 - 1.4
14,382 - -0.0
14,501 - 2.4
14,553 + 0.6
14,802 + 9303 mRNA_935 0.15 0.1
14,804 - 9303 mRNA_935 0.15 0.5
14,914 + 9303 mRNA_935 0.22 0.3
14,946 - 9303 mRNA_935 0.24 1.1
14,983 - 9303 mRNA_935 0.26 0.5
15,237 - 9303 mRNA_935 0.41 -0.5
15,245 - 9303 mRNA_935 0.42 -0.4
15,262 + 9303 mRNA_935 0.43 0.3