Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_929

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_928: 9296 - Hypothetical Protein, at 2213301 to 2214624 9296 mRNA_929: 9297 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 2215057 to 2216039 9297

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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2,214,242 + 9296 mRNA_928 0.71 -1.2
2,214,246 - 9296 mRNA_928 0.71 -0.4
2,214,281 - 9296 mRNA_928 0.74 -0.7
2,214,387 - 9296 mRNA_928 0.82 -0.6
2,214,418 - 9296 mRNA_928 0.84 -1.1
2,214,491 - 9296 mRNA_928 0.90 -2.5
2,214,558 - -1.5
2,214,563 - -0.4
2,214,570 + -1.2
2,214,701 - -0.1
2,214,754 - 0.2
2,214,812 - -0.2
2,214,970 + -1.1
2,214,981 - -0.5
2,215,011 + -1.2
2,215,128 + 1.3
2,215,141 - 0.3
2,215,144 - -0.5
2,215,151 - -0.4
2,215,168 - 9297 mRNA_929 0.11 0.7
2,215,282 - 9297 mRNA_929 0.23 0.7
2,215,291 - 9297 mRNA_929 0.24 0.1
2,215,376 - 9297 mRNA_929 0.32 -1.0
2,215,415 - 9297 mRNA_929 0.36 1.3
2,215,437 - 9297 mRNA_929 0.39 -2.2
2,215,457 - 9297 mRNA_929 0.41 -1.0
2,215,478 + 9297 mRNA_929 0.43 -0.6
2,215,514 - 9297 mRNA_929 0.46 0.3
2,215,558 - 9297 mRNA_929 0.51 -0.4
2,215,569 - 9297 mRNA_929 0.52 -1.9
2,215,580 - 9297 mRNA_929 0.53 -0.3
2,215,588 - 9297 mRNA_929 0.54 1.8
2,215,594 + 9297 mRNA_929 0.55 -1.6
2,215,597 + 9297 mRNA_929 0.55 1.1
2,215,601 - 9297 mRNA_929 0.55 -0.4
2,215,603 - 9297 mRNA_929 0.56 -0.7
2,215,656 - 9297 mRNA_929 0.61 -0.2
2,215,657 - 9297 mRNA_929 0.61 -1.1
2,215,687 - 9297 mRNA_929 0.64 -1.2
2,215,693 + 9297 mRNA_929 0.65 -0.7
2,215,693 - 9297 mRNA_929 0.65 -0.0
2,215,698 - 9297 mRNA_929 0.65 -1.5
2,215,706 + 9297 mRNA_929 0.66 -0.7
2,215,716 + 9297 mRNA_929 0.67 -3.0
2,215,717 - 9297 mRNA_929 0.67 1.2
2,215,718 + 9297 mRNA_929 0.67 2.0
2,215,721 - 9297 mRNA_929 0.68 -0.2
2,215,724 + 9297 mRNA_929 0.68 -0.3
2,215,727 + 9297 mRNA_929 0.68 0.3
2,215,729 - 9297 mRNA_929 0.68 -0.2
2,215,731 - 9297 mRNA_929 0.69 0.5
2,215,735 - 9297 mRNA_929 0.69 -0.9
2,215,735 - 9297 mRNA_929 0.69 0.4
2,215,742 - 9297 mRNA_929 0.70 1.0
2,215,753 - 9297 mRNA_929 0.71 2.0
2,215,754 - 9297 mRNA_929 0.71 0.5
2,215,759 - 9297 mRNA_929 0.71 -2.1
2,215,780 + 9297 mRNA_929 0.74 -1.3
2,215,810 - 9297 mRNA_929 0.77 1.3
2,215,810 - 9297 mRNA_929 0.77 -1.0
2,215,829 + 9297 mRNA_929 0.79 -0.8
2,215,833 - 9297 mRNA_929 0.79 -1.0
2,215,858 - 9297 mRNA_929 0.81 -0.1
2,215,864 + 9297 mRNA_929 0.82 -0.1
2,215,886 - 9297 mRNA_929 0.84 -0.1
2,215,888 - 9297 mRNA_929 0.85 -1.2
2,215,895 + 9297 mRNA_929 0.85 0.2
2,215,895 - 9297 mRNA_929 0.85 1.7
2,215,899 + 9297 mRNA_929 0.86 -2.8
2,215,928 + 9297 mRNA_929 0.89 0.0
2,215,948 - 0.9
2,215,950 - -2.2
2,215,950 - -1.3
2,215,950 - -1.5
2,216,033 - 0.6
2,216,035 - 0.6
2,216,038 - -1.3
2,216,080 - -2.2
2,216,080 - 0.6
2,216,085 - -0.4
2,216,085 - 0.4
2,216,085 - 0.6
2,216,085 - 0.1
2,216,085 - 1.6