Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_831

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_830: 9198 - K00413 CYC1, CYT1, petC ubiquinol-cytochrome c reductase cytochrome c1 subunit, at 1988995 to 1990549 9198 mRNA_831: 9199 - K12366 ELMO1, CED12 engulfment and cell motility protein 1, at 1990939 to 1993710 9199 mRNA_832: 9200 - K08835 OXSR1, STK39 serine/threonine-protein kinase OSR1/STK39, at 1993730 to 1995894 9200

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,990,580 - -1.4
1,990,889 + -0.2
1,991,000 - -0.8
1,991,179 - 0.4
1,991,346 + 9199 mRNA_831 0.15 0.1
1,991,353 - 9199 mRNA_831 0.15 -0.0
1,991,600 - 9199 mRNA_831 0.24 -0.2
1,991,953 - 9199 mRNA_831 0.37 -0.1
1,992,061 + 9199 mRNA_831 0.40 1.4
1,992,198 + 9199 mRNA_831 0.45 -1.6
1,992,655 + 9199 mRNA_831 0.62 1.2
1,993,202 + 9199 mRNA_831 0.82 0.5
1,993,208 + 9199 mRNA_831 0.82 0.7
1,993,519 + 0.5
1,993,529 - 0.4
1,993,642 - 0.4
1,993,788 + 0.9
1,993,952 - 9200 mRNA_832 0.10 -2.4
1,993,956 + 9200 mRNA_832 0.10 0.6
1,993,959 + 9200 mRNA_832 0.11 -0.0
1,994,069 - 9200 mRNA_832 0.16 1.5
1,994,231 + 9200 mRNA_832 0.23 0.5
1,994,534 + 9200 mRNA_832 0.37 0.4
1,994,536 - 9200 mRNA_832 0.37 0.2
1,994,677 - 9200 mRNA_832 0.44 -0.3
1,994,677 - 9200 mRNA_832 0.44 0.2