Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_793

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_792: 9160 - SUPERFAMILY--SSF52047, at 1882610 to 1885727 9160 mRNA_793: 9161 - KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit, at 1885981 to 1887715 9161 mRNA_794: 9162 - K14834 NOC3 nucleolar complex protein 3, at 1887871 to 1891135 9162

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,884,992 + 9160 mRNA_792 0.76 -1.6
1,885,019 + 9160 mRNA_792 0.77 -0.5
1,885,152 + 9160 mRNA_792 0.82 1.1
1,885,160 - 9160 mRNA_792 0.82 -1.4
1,885,469 + -1.5
1,885,499 - 0.1
1,885,579 - -1.0
1,885,601 - 1.0
1,885,733 + -1.3
1,885,752 - -0.8
1,885,762 - -1.6
1,885,930 + 0.5
1,886,015 - -0.3
1,886,051 - -0.3
1,886,053 + -0.6
1,886,053 + 0.4
1,886,070 + -2.8
1,886,216 + 9161 mRNA_793 0.14 0.4
1,886,792 + 9161 mRNA_793 0.47 -1.8
1,886,890 - 9161 mRNA_793 0.52 -1.2
1,886,893 + 9161 mRNA_793 0.53 0.9
1,887,049 - 9161 mRNA_793 0.62 -0.7
1,887,058 - 9161 mRNA_793 0.62 -0.4
1,887,063 + 9161 mRNA_793 0.62 1.3
1,887,064 - 9161 mRNA_793 0.62 1.9
1,887,193 - 9161 mRNA_793 0.70 1.2
1,887,464 - 9161 mRNA_793 0.85 -0.7
1,887,631 + -0.3
1,887,787 + 0.8