Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_784

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_783: 9151 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 1864111 to 1866017 9151 mRNA_784: 9152 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1866333 to 1867961 9152 mRNA_785: 9153 - K07305 msrB peptide-methionine (R)-S-oxide reductase, at 1868475 to 1869401 9153

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,865,368 - 9151 mRNA_783 0.66 -0.8
1,865,399 + 9151 mRNA_783 0.68 -1.1
1,865,798 + 9151 mRNA_783 0.88 1.0
1,865,810 - 9151 mRNA_783 0.89 -0.7
1,865,839 + -0.7
1,865,972 + -1.6
1,866,044 - -0.7
1,866,096 + -0.3
1,866,106 - -0.5
1,866,552 - 9152 mRNA_784 0.13 -0.2
1,866,553 - 9152 mRNA_784 0.14 0.3
1,866,555 - 9152 mRNA_784 0.14 1.1
1,866,559 + 9152 mRNA_784 0.14 2.5
1,866,974 - 9152 mRNA_784 0.39 -2.2
1,867,426 - 9152 mRNA_784 0.67 0.8
1,867,466 + 9152 mRNA_784 0.70 1.2
1,867,548 - 9152 mRNA_784 0.75 0.0
1,868,185 - 0.3
1,868,439 - 0.4
1,868,740 + 9153 mRNA_785 0.29 0.4