Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_722

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_721: 9089 - Hypothetical Protein, at 1720522 to 1720982 9089 mRNA_722: 9090 - HMMPfam-Thiopurine S-methyltransferase (TPMT)-PF05724,ProSiteProfiles-Thiopurine or thiol or thiocyanate S-methyltransferase (TPMT) family profile.-PS51585,SUPERFAMILY--SSF53335, at 1721535 to 1722519 9090 mRNA_723: 9091 - K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase, at 1722992 to 1724496 9091

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,721,110 + -0.7
1,721,218 + 1.1
1,721,236 + 0.3
1,721,237 + -1.3
1,721,374 - -0.4
1,721,520 + 0.2
1,721,529 - -0.9
1,721,534 - 0.4
1,721,551 - -0.0
1,721,685 + 9090 mRNA_722 0.15 -1.1
1,721,700 + 9090 mRNA_722 0.17 -1.9
1,721,986 + 9090 mRNA_722 0.46 -0.8
1,722,134 + 9090 mRNA_722 0.61 0.1
1,722,559 - -0.7
1,722,575 + 1.8
1,722,575 + -1.7
1,722,719 + -0.2
1,723,272 - 9091 mRNA_723 0.19 -1.2
1,723,280 + 9091 mRNA_723 0.19 0.0
1,723,463 - 9091 mRNA_723 0.31 0.3