Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_704

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_703: 9071 - K20223 IPO7, RANBP7 importin-7, at 1681177 to 1685261 9071 mRNA_704: 9072 - Hypothetical Protein, at 1685751 to 1686578 9072 mRNA_705: 9073 - Hypothetical Protein, at 1686882 to 1687681 9073

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,685,145 + 0.0
1,685,152 + -1.8
1,685,280 + 0.1
1,685,285 - 0.3
1,685,285 - -1.7
1,685,288 - 1.8
1,685,289 + 1.9
1,685,294 - -1.6
1,685,296 - -1.0
1,685,303 + 1.2
1,685,307 + 1.1
1,685,313 + -0.6
1,685,453 + -2.9
1,685,478 + 1.6
1,685,480 - -0.3
1,685,488 - -0.6
1,685,586 - -0.7
1,685,612 + -0.7
1,685,615 - 0.1
1,685,716 - -0.4
1,685,766 - 1.0
1,685,767 + -0.3
1,685,811 + 0.1
1,685,900 - 9072 mRNA_704 0.18 0.1
1,685,915 + 9072 mRNA_704 0.20 0.2
1,686,066 + 9072 mRNA_704 0.38 0.7
1,686,177 - 9072 mRNA_704 0.51 2.5
1,686,182 + 9072 mRNA_704 0.52 1.3
1,686,326 + 9072 mRNA_704 0.69 -2.3
1,686,508 + -0.2
1,686,601 + 1.8
1,686,614 + 0.7
1,686,689 + 0.9
1,686,707 + -3.3
1,686,716 + 0.3
1,686,724 - -0.4
1,686,732 + 0.1
1,686,749 + -0.9
1,686,772 + -0.2
1,686,789 + 0.2
1,686,791 - 3.4
1,686,797 + 1.6
1,686,805 - -1.9
1,686,811 + 0.0
1,686,812 + 1.3
1,686,814 - -0.8
1,686,836 + 0.5
1,686,837 + 0.6
1,686,839 + -0.6
1,686,931 - -0.3
1,686,982 + 9073 mRNA_705 0.12 -2.0
1,687,107 + 9073 mRNA_705 0.28 0.0
1,687,249 - 9073 mRNA_705 0.46 0.1
1,687,254 - 9073 mRNA_705 0.47 0.3
1,687,385 - 9073 mRNA_705 0.63 -0.5
1,687,521 + 9073 mRNA_705 0.80 -0.0
1,687,550 + 9073 mRNA_705 0.83 -1.0