Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_660

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_659: 9027 - Hypothetical Protein, at 1586491 to 1589993 9027 mRNA_660: 9028 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 1590128 to 1592290 9028 mRNA_661: 9029 - Hypothetical Protein, at 1593045 to 1593501 9029

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,589,397 - 9027 mRNA_659 0.83 -0.6
1,589,413 + 9027 mRNA_659 0.83 -1.0
1,589,660 - 2.8
1,590,018 - -0.9
1,590,035 - -1.0
1,590,042 + -0.4
1,590,044 + -0.3
1,590,176 + 1.2
1,590,185 - 0.0
1,590,203 - -0.5
1,590,342 - -2.0
1,590,343 + 1.6
1,590,344 + -0.8
1,590,348 - 9028 mRNA_660 0.10 -0.2
1,590,386 + 9028 mRNA_660 0.12 0.2
1,590,386 + 9028 mRNA_660 0.12 0.4
1,590,486 - 9028 mRNA_660 0.17 -0.7
1,591,237 + 9028 mRNA_660 0.51 0.9
1,591,453 - 9028 mRNA_660 0.61 1.0
1,592,070 + 9028 mRNA_660 0.90 1.9
1,592,091 - 0.4
1,592,497 + 0.6
1,592,506 - 1.4
1,592,518 - -0.7
1,592,525 + 0.8
1,592,689 - -0.0
1,592,696 + 1.2
1,592,837 - -1.2
1,592,842 + -1.3
1,593,262 - 9029 mRNA_661 0.47 0.1