Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_632

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_632: 9000 - K17900 ATG15, AUT5 lipase ATG15, at 1516268 to 1517647 9000 mRNA_633: 9001 - K14575 AFG2, DRG1, SPATA5 AAA family ATPase, at 1517920 to 1520918 9001

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,515,309 + 1.0
1,515,350 - 0.0
1,515,523 - -0.2
1,515,785 - -0.4
1,515,845 + 0.3
1,515,853 - 1.2
1,515,856 - -1.3
1,515,859 + 1.8
1,515,861 - 0.2
1,516,012 + -2.3
1,516,018 - -2.0
1,516,140 - 0.3
1,516,151 + -0.4
1,516,584 + 9000 mRNA_632 0.23 -0.9
1,516,768 + 9000 mRNA_632 0.36 -1.7
1,516,845 - 9000 mRNA_632 0.42 -3.0
1,517,022 - 9000 mRNA_632 0.55 -0.3
1,517,295 - 9000 mRNA_632 0.74 -1.9
1,517,439 + 9000 mRNA_632 0.85 -1.2
1,517,459 + 9000 mRNA_632 0.86 -2.4
1,517,588 - -2.2
1,517,755 + 1.7
1,517,885 + 2.5