Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_506

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_506: 8874 - K08793 STK32, YANK serine/threonine kinase 32, at 1203196 to 1205360 8874 mRNA_507: 8875 - K19347 SUN1_2 SUN domain-containing protein 1/2, at 1206155 to 1210007 8875

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,202,263 - -1.1
1,202,271 - -0.5
1,202,367 + -1.1
1,202,550 + 2.8
1,202,564 + -0.2
1,202,682 - 0.1
1,202,705 + 3.2
1,202,713 + -1.2
1,202,718 + -0.1
1,202,853 - 0.2
1,202,854 + 0.0
1,202,854 + 0.6
1,202,877 + 1.3
1,202,901 - 0.7
1,202,977 - -0.2
1,203,002 + 0.0
1,203,044 + 0.5
1,203,053 + -1.0
1,203,173 + -0.3
1,203,185 + -0.2
1,203,189 + -0.4
1,203,303 + -0.3
1,203,324 + -1.3
1,203,339 + -1.4
1,203,473 + 8874 mRNA_506 0.13 -1.1
1,203,627 + 8874 mRNA_506 0.20 -0.3
1,203,742 + 8874 mRNA_506 0.25 0.2
1,204,177 - 8874 mRNA_506 0.45 -0.3
1,204,440 - 8874 mRNA_506 0.57 0.3
1,204,635 - 8874 mRNA_506 0.66 -0.0
1,204,803 - 8874 mRNA_506 0.74 0.3
1,204,888 + 8874 mRNA_506 0.78 1.3
1,205,137 - 8874 mRNA_506 0.90 -0.1
1,205,497 - 0.9
1,205,797 - -0.7