Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_423

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_422: 8790 - KOG0911 Glutaredoxin-related protein, at 984573 to 985710 8790 mRNA_423: 8791 - KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion, at 985910 to 986810 8791 mRNA_424: 8792 - HMMPfam-Diaphanous GTPase-binding Domain-PF06371,SUPERFAMILY--SSF48371, at 987368 to 990699 8792

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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985,680 + 0.3
985,804 + 0.8
986,081 + 8791 mRNA_423 0.19 -1.3
986,551 - 8791 mRNA_423 0.71 -2.1
986,663 - 8791 mRNA_423 0.84 -1.1
986,698 - 8791 mRNA_423 0.87 1.1
986,935 - -2.6
986,945 - 0.3
986,956 + -0.5
986,964 + -1.2
986,989 - -0.1
987,122 - -1.1
987,132 - -2.4
987,154 + 2.4
987,189 - 1.6
987,290 + -1.4
987,306 - 0.5
987,335 + -0.3
987,381 - 1.0
987,442 + -2.5
987,563 - -0.4
987,717 - 8792 mRNA_424 0.10 -0.7
987,728 - 8792 mRNA_424 0.11 -1.0
987,749 - 8792 mRNA_424 0.11 -2.7