Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_396

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_395: 8763 - KOG2262 Sexual differentiation process protein ISP4, at 918678 to 921418 8763 mRNA_396: 8764 - K07478 ycaJ putative ATPase, at 921691 to 924142 8764 mRNA_397: 8765 - SUPERFAMILY--SSF52047, at 924312 to 925720 8765

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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921,273 - -0.4
921,349 + -0.5
921,462 + -0.2
921,462 + 0.9
921,758 - 0.1
921,779 + -0.6
921,915 + 0.4
921,944 + 8764 mRNA_396 0.10 1.2
922,038 - 8764 mRNA_396 0.14 1.3
922,047 - 8764 mRNA_396 0.15 0.5
922,357 - 8764 mRNA_396 0.27 -0.3
922,942 - 8764 mRNA_396 0.51 0.3
923,092 - 8764 mRNA_396 0.57 0.2
923,518 - 8764 mRNA_396 0.75 0.6
923,546 - 8764 mRNA_396 0.76 -0.1
923,553 - 8764 mRNA_396 0.76 -1.2
924,076 - -0.2
924,126 - 0.4
924,389 - -0.6
924,518 - 8765 mRNA_397 0.15 -0.7
924,536 - 8765 mRNA_397 0.16 1.0
924,542 + 8765 mRNA_397 0.16 0.7
924,560 + 8765 mRNA_397 0.18 0.5
924,650 + 8765 mRNA_397 0.24 0.5
924,783 - 8765 mRNA_397 0.33 1.1
924,994 + 8765 mRNA_397 0.48 1.7