Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_347

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_346: 8714 - KOG3113 Uncharacterized conserved protein, at 810935 to 812073 8714 mRNA_347: 8715 - K01358 clpP, CLPP ATP-dependent Clp protease, protease subunit, at 812263 to 813594 8715 mRNA_348: 8716 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 813811 to 815656 8716

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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811,779 - 8714 mRNA_346 0.74 1.6
811,936 + 8714 mRNA_346 0.88 1.2
812,083 + -2.2
812,210 - 1.4
812,408 - 8715 mRNA_347 0.11 1.2
812,431 + 8715 mRNA_347 0.13 1.2
812,504 - 8715 mRNA_347 0.18 0.1
812,505 + 8715 mRNA_347 0.18 -0.7
812,507 + 8715 mRNA_347 0.18 -1.3
812,524 - 8715 mRNA_347 0.20 0.3
812,532 + 8715 mRNA_347 0.20 -0.2
812,535 + 8715 mRNA_347 0.20 -0.7
812,917 - 8715 mRNA_347 0.49 1.2
812,959 - 8715 mRNA_347 0.52 0.0
812,966 + 8715 mRNA_347 0.53 -0.1
813,126 + 8715 mRNA_347 0.65 1.9
813,181 + 8715 mRNA_347 0.69 -1.6
813,668 - 2.0
813,707 - 0.8
813,791 - -0.5
813,942 - -0.8
814,248 + 8716 mRNA_348 0.24 -1.3
814,377 - 8716 mRNA_348 0.31 -2.1
814,392 - 8716 mRNA_348 0.31 -0.9
814,521 + 8716 mRNA_348 0.38 0.6
814,542 - 8716 mRNA_348 0.40 2.3