Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_333

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_332: 8700 - HMMPfam-DSS1/SEM1 family-PF05160, at 788095 to 788775 8700 mRNA_333: 8701 - Hypothetical Protein, at 789358 to 791102 8701

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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788,796 + 1.8
788,806 - 2.5
788,807 + -0.7
788,827 + 1.6
788,829 + -0.9
788,958 - 1.0
788,959 + -0.0
789,091 + -2.0
789,119 - -2.8
789,187 - 0.7
789,204 - -2.1
789,238 - 1.0
789,683 + 8701 mRNA_333 0.19 0.3
789,694 - 8701 mRNA_333 0.19 0.1
789,855 - 8701 mRNA_333 0.28 -1.2
790,108 - 8701 mRNA_333 0.43 -0.2
790,133 + 8701 mRNA_333 0.44 -0.2
790,250 + 8701 mRNA_333 0.51 1.5
790,255 + 8701 mRNA_333 0.51 -0.2
790,270 - 8701 mRNA_333 0.52 -0.1
790,420 + 8701 mRNA_333 0.61 -0.4
790,536 - 8701 mRNA_333 0.68 1.3
790,577 + 8701 mRNA_333 0.70 1.3
790,832 + 8701 mRNA_333 0.84 -0.2
790,838 - 8701 mRNA_333 0.85 -0.4
790,854 - 8701 mRNA_333 0.86 -0.9
790,866 + 8701 mRNA_333 0.86 0.0
790,994 + -0.9
790,997 - 1.9
791,010 - -1.7
791,014 - -0.4
791,022 + 0.6
791,147 + 0.2
791,150 + 1.5
791,157 - -2.5
791,158 - -0.0
791,167 + -0.1
791,168 + -1.6
791,170 + 0.2
791,177 + -0.6
791,292 + 1.0
791,298 - 0.0
791,299 - -2.3
791,303 + 0.9
791,311 - -4.4
791,311 - -1.1
791,314 + -0.7
791,314 + -0.7
791,317 - 0.8
791,321 + -0.2
791,329 - -0.2
791,416 - -0.7
791,435 - -0.4
791,437 + 0.9
791,439 + -0.9
791,441 - 0.1
791,445 - -1.6
791,449 + 1.4
791,450 + 0.1
791,452 - 0.6
791,455 - -0.1
791,462 + -1.4
791,475 - 0.6
791,483 - 0.9
791,489 + 0.3
791,494 - 0.0
791,496 - 2.6
791,496 - 0.4
791,497 + 0.5
791,513 - 0.9
791,514 + -0.2
791,522 - -0.8
791,532 - -0.4
791,533 + -1.1
791,536 - 0.5
791,551 + 1.1
791,618 - -0.2
791,627 - -0.9
791,631 - 1.9
791,641 - 0.3
791,644 + -0.9
791,645 + 1.7
791,649 + -0.0
791,653 - -1.4
791,653 + -0.4
791,660 - -0.2
791,666 - -0.2
791,670 - 1.0
791,674 + -1.4
791,685 - -0.6
791,693 + -0.2
791,697 + -0.3
791,706 - 0.2
791,725 - 1.3
791,731 + 1.3
791,732 + -0.4
791,733 - 1.4
791,749 - -0.6
791,762 + -0.3
791,909 - 0.3
791,916 - 1.5
791,918 + -0.7
792,054 + -0.4
792,068 - 0.4