Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_284

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_283: 8651 - K00872 thrB1 homoserine kinase, at 673914 to 675244 8651 mRNA_284: 8652 - K01762 ACS 1-aminocyclopropane-1-carboxylate synthase, at 676013 to 677803 8652 mRNA_285: 8653 - Hypothetical Protein, at 678143 to 678782 8653

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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675,317 - -1.2
675,638 + -0.4
675,764 - -1.7
675,766 - 0.3
675,792 - 0.6
675,808 + -0.5
675,815 + 0.9
675,936 + 1.0
676,081 + 0.9
676,368 - 8652 mRNA_284 0.20 -0.4
677,114 - 8652 mRNA_284 0.61 -0.2
677,117 - 8652 mRNA_284 0.62 1.5
677,504 + 8652 mRNA_284 0.83 0.2
677,825 + -0.1
677,941 - -0.4
678,002 + 1.4
678,014 + -1.3
678,124 - -0.2
678,127 - -0.7
678,139 - 0.3
678,276 + 8653 mRNA_285 0.21 1.6
678,279 - 8653 mRNA_285 0.21 0.7