Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_282

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_281: 8649 - KOG0653 Cyclin B and related kinase-activating proteins, at 669704 to 671491 8649 mRNA_282: 8650 - Hypothetical Protein, at 672440 to 673215 8650 mRNA_283: 8651 - K00872 thrB1 homoserine kinase, at 673914 to 675244 8651

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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671,498 - 0.5
671,498 - -0.1
671,509 - 2.5
671,537 + -0.9
671,561 - 1.1
671,564 + -0.5
671,665 - -0.1
671,674 - 1.0
671,681 + -0.6
671,681 - -0.2
671,694 + 1.7
671,694 + 0.7
671,700 - -0.9
671,704 + 0.4
671,825 + 2.8
671,843 + 0.6
671,845 - 1.0
671,846 - -0.4
671,848 + 0.3
671,850 - -0.4
671,854 + 2.2
671,863 - 0.6
671,866 - 0.1
671,866 + 0.5
671,866 + 0.5
671,867 - -0.9
671,873 + 1.1
671,875 - -0.2
671,875 - -0.0
671,881 + -1.4
671,885 + -0.8
671,886 - 0.7
671,893 - 1.4
671,902 + -2.6
671,920 + 0.4
671,927 + 1.6
671,995 - -1.1
672,003 + -1.2
672,004 - -0.6
672,009 - 0.8
672,018 + 1.5
672,023 - 2.2
672,029 - 0.4
672,029 + -0.5
672,038 - 0.8
672,044 - -0.2
672,044 + -3.1
672,045 + 2.2
672,049 + 0.6
672,058 - 0.4
672,139 - 0.1
672,146 + 0.4
672,164 + -1.0
672,165 - -0.4
672,165 - -1.1
672,169 - 1.4
672,175 - -1.0
672,190 - 0.5
672,276 + 0.5
672,293 - -1.8
672,309 + -2.0
672,320 - 0.6
672,331 + -0.3
672,336 - -1.4
672,357 + -1.0
672,360 + 0.2
672,363 + -3.0
672,372 - -0.2
672,375 + 2.1
672,376 - 0.7
672,379 + 0.1
672,379 + 1.2
672,386 + 1.7
672,395 + 0.8
672,399 + 0.8
672,403 - -0.5
672,430 - -0.3
672,479 + 2.5
672,506 - 1.0
672,529 - 8650 mRNA_282 0.11 -0.9
672,589 + 8650 mRNA_282 0.19 -1.1
672,699 + 8650 mRNA_282 0.33 -0.4
672,774 - 8650 mRNA_282 0.43 0.9
672,799 + 8650 mRNA_282 0.46 -0.2
672,799 - 8650 mRNA_282 0.46 0.2
672,800 + 8650 mRNA_282 0.46 1.6
672,805 + 8650 mRNA_282 0.47 0.2
672,821 - 8650 mRNA_282 0.49 -3.2
672,824 - 8650 mRNA_282 0.49 -0.0
672,827 + 8650 mRNA_282 0.50 -0.3
672,828 + 8650 mRNA_282 0.50 -2.2
672,851 + 8650 mRNA_282 0.53 -0.9
672,876 - 8650 mRNA_282 0.56 -0.4
672,952 - 8650 mRNA_282 0.66 0.9
673,010 + 8650 mRNA_282 0.73 -3.8
673,014 + 8650 mRNA_282 0.74 -0.8
673,059 - 8650 mRNA_282 0.80 -0.5
673,165 + -0.9
673,215 + -1.5
673,523 + 1.0
673,882 + -3.1