Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_264

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_264: 8632 - BLAST phosphoglycerate mutase-like protein [Sanghuangporus ..., at 636296 to 637192 8632 mRNA_265: 8633 - K00876 udk, UCK uridine kinase, at 637479 to 639717 8633

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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635,325 - 0.1
635,329 - 0.3
635,362 - -0.2
635,772 - 0.5
636,493 + 8632 mRNA_264 0.22 -0.0
636,494 + 8632 mRNA_264 0.22 -0.1
636,599 + 8632 mRNA_264 0.34 -0.6
636,764 + 8632 mRNA_264 0.52 0.1
636,925 - 8632 mRNA_264 0.70 -0.0
636,936 - 8632 mRNA_264 0.71 -0.3
636,939 + 8632 mRNA_264 0.72 -0.1
637,072 + 8632 mRNA_264 0.87 1.7
637,225 - -0.6
637,225 - 1.0
637,229 + -0.7
637,232 - 0.2
637,370 + 0.1
637,374 + -0.8
637,381 - -0.4
637,511 - -1.0
637,661 - -1.8