Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_226

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556962 to 559070 8593 mRNA_226: 8594 - KOG2861 Uncharacterized conserved protein, at 559154 to 560792 8594 mRNA_227: 8595 - K03259 EIF4E translation initiation factor 4E, at 561039 to 562506 8595

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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558,406 + 8593 mRNA_225 0.68 -0.0
558,443 + 8593 mRNA_225 0.70 -1.5
558,954 - 1.2
559,253 - 1.4
559,275 + -0.1
559,300 + -0.7
559,528 - 8594 mRNA_226 0.23 -0.7
559,694 + 8594 mRNA_226 0.33 0.3
559,701 + 8594 mRNA_226 0.33 0.1
559,855 + 8594 mRNA_226 0.43 -2.0
560,129 + 8594 mRNA_226 0.59 0.3
560,425 - 8594 mRNA_226 0.78 0.4
560,884 - -0.7
561,130 - -3.1
561,429 - 8595 mRNA_227 0.27 -0.3
561,441 + 8595 mRNA_227 0.27 0.0
561,713 - 8595 mRNA_227 0.46 1.4