Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_224

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_224: 8592 - K07300 chaA, CAX Ca2+-H+ antiporter, at 554235 to 556538 8592 mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556962 to 559070 8593

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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553,253 + 0.3
553,271 - -1.8
553,273 - 0.2
553,862 - 1.9
553,866 + 0.0
553,869 + -0.2
553,884 + 0.0
553,884 + -0.1
553,890 + -0.8
553,960 - -0.7
554,553 + 8592 mRNA_224 0.14 1.2
555,256 - 8592 mRNA_224 0.44 -0.9
556,428 - 0.1
556,431 + -0.4
556,459 - 0.3
556,737 - -0.2
556,740 + -0.5
556,741 + 4.0
556,744 - -1.0
556,745 + 0.3
556,745 + 0.1
556,746 - 2.0
556,764 - -1.2
556,766 + -0.2
556,769 - 0.1
556,770 + 0.7
556,793 - 1.1
556,924 - 0.2
556,946 - -0.4
556,981 + 0.5