Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_160

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_159: 8527 - Hypothetical Protein, at 394494 to 395592 8527 mRNA_160: 8528 - K05349 bglX beta-glucosidase, at 396327 to 398883 8528 mRNA_161: 8529 - KOG1727 Microtubule-binding protein (translationally controlled tumor protein), at 399773 to 400854 8529

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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395,573 + 0.0
395,686 + 0.3
396,176 + 1.7
396,607 + 8528 mRNA_160 0.11 0.8
396,692 - 8528 mRNA_160 0.14 1.3
397,006 + 8528 mRNA_160 0.27 -0.4
397,347 + 8528 mRNA_160 0.40 -0.3
397,488 + 8528 mRNA_160 0.45 -0.3
397,903 - 8528 mRNA_160 0.62 1.8
398,054 + 8528 mRNA_160 0.68 -1.7
398,343 + 8528 mRNA_160 0.79 0.4
398,486 - 8528 mRNA_160 0.84 0.4
398,504 + 8528 mRNA_160 0.85 -1.6
398,688 + -1.5
398,995 - -0.1
399,262 + 0.3
399,284 - 0.0