Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_158

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_157: 8525 - KOG3066 Translin-associated protein X, at 391378 to 392552 8525 mRNA_158: 8526 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 392732 to 393571 8526 mRNA_159: 8527 - Hypothetical Protein, at 394494 to 395592 8527

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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391,740 - 8525 mRNA_157 0.31 1.2
391,776 - 8525 mRNA_157 0.34 0.6
392,222 - 8525 mRNA_157 0.72 0.7
392,255 - 8525 mRNA_157 0.75 0.8
392,641 - 0.4
392,768 - 2.2
393,026 - 8526 mRNA_158 0.35 -0.5
393,249 + 8526 mRNA_158 0.62 -1.7
393,362 - 8526 mRNA_158 0.75 2.1
393,929 - -1.3
393,963 + -0.1
393,967 - -0.7
394,007 + 0.9
394,047 - -0.7
394,061 + -1.3
394,070 + -0.1
394,221 + -1.1
394,222 - 0.1
394,223 - -0.3
394,226 - -0.2
394,228 + -0.3
394,228 + 2.1
394,234 - -0.1
394,236 + -1.2
394,242 - -0.2
394,252 - -2.2
394,259 + 1.5
394,260 + 0.2
394,260 + 0.7
394,263 - -0.3
394,265 + 0.5
394,265 - 0.3
394,288 - 2.5
394,306 - -0.1
394,333 + -0.9
394,361 - -2.2
394,363 + -0.2
394,375 - -0.9
394,375 - 0.3
394,375 - 0.4
394,382 + -0.9
394,382 + 1.2
394,383 - -0.4
394,399 - -1.1
394,407 + 0.5
394,411 - -0.8
394,413 + 1.3
394,419 + -2.4
394,438 - -0.2
394,444 + 0.6
394,445 - 1.7
394,558 - 0.7
394,568 + -0.2
394,570 + -0.3