Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_142

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_141: 8509 - Hypothetical Protein, at 339978 to 342089 8509 mRNA_142: 8510 - HMMPfam-Protein of unknown function (DUF3712)-PF12505, at 343005 to 355699 8510 mRNA_143: 8511 - KOG4136 Predicted mitochondrial cholesterol transporter, at 356168 to 357922 8511

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
342,072 + -0.1
342,127 + -0.1
342,129 + -0.6
342,131 - -1.2
342,144 + 0.1
342,149 - 0.4
342,167 + 0.1
342,171 - -0.1
342,177 + -0.0
342,187 - -0.5
342,220 - -2.2
342,230 - -0.6
342,230 - -0.4
342,248 - 1.1
342,249 + -1.2
342,250 - -1.9
342,250 + -0.5
342,274 + 0.0
342,293 - -0.0
342,309 - -0.0
342,313 + -0.2
342,317 - -0.3
342,326 - -0.4
342,328 - 1.2
342,328 - 1.4
342,330 - -0.9
342,337 - 0.5
342,342 + -0.5
342,344 + -2.4
342,344 + -0.3
342,353 + -2.9
342,476 + -1.1
342,477 + 1.6
342,487 + 0.3
342,488 - -0.8
342,491 - -2.3
342,493 - -1.6
342,550 - 0.6
342,591 - -0.2
342,611 - 0.3
342,619 - 1.4
342,620 + -0.8
342,626 + 0.1
342,639 - -0.2
342,652 + 0.4
342,742 - -1.2
342,750 - -0.5
342,759 - 2.2
342,761 + -1.4
342,762 + -0.3
342,791 - -0.8
342,793 + 0.5
342,808 - 0.2
342,811 + -0.2
342,884 - -1.3
342,951 + -1.5
342,996 - -2.3
343,129 - -0.5
343,132 - -2.7
343,136 + -0.4
343,148 - -0.3
343,184 - 1.9
343,473 + 0.1
344,027 - 0.1
344,199 - -0.5
344,524 - 8510 mRNA_142 0.12 -0.5
344,617 + 8510 mRNA_142 0.13 0.2
344,632 - 8510 mRNA_142 0.13 0.1
344,680 + 8510 mRNA_142 0.13 1.3
344,966 + 8510 mRNA_142 0.15 -0.4
345,239 - 8510 mRNA_142 0.18 -0.8
345,394 + 8510 mRNA_142 0.19 0.2
345,419 - 8510 mRNA_142 0.19 0.6
345,458 + 8510 mRNA_142 0.19 -0.7
345,527 - 8510 mRNA_142 0.20 -0.7
345,687 + 8510 mRNA_142 0.21 0.4
345,741 - 8510 mRNA_142 0.22 -1.6
345,764 + 8510 mRNA_142 0.22 1.2
345,784 + 8510 mRNA_142 0.22 0.0
346,252 - 8510 mRNA_142 0.26 -1.1
346,292 + 8510 mRNA_142 0.26 0.9
346,445 - 8510 mRNA_142 0.27 -0.6
346,527 - 8510 mRNA_142 0.28 2.3
346,605 + 8510 mRNA_142 0.28 -0.3
346,649 + 8510 mRNA_142 0.29 0.5
346,705 - 8510 mRNA_142 0.29 0.8
346,746 + 8510 mRNA_142 0.29 -1.2
347,055 - 8510 mRNA_142 0.32 -1.7
347,061 - 8510 mRNA_142 0.32 0.2
347,068 - 8510 mRNA_142 0.32 0.7
347,074 + 8510 mRNA_142 0.32 0.4
347,166 - 8510 mRNA_142 0.33 -2.6
347,192 + 8510 mRNA_142 0.33 -0.4
347,193 + 8510 mRNA_142 0.33 -1.4
347,272 - 8510 mRNA_142 0.34 1.9
347,592 - 8510 mRNA_142 0.36 1.1
347,635 - 8510 mRNA_142 0.36 -1.0
347,645 + 8510 mRNA_142 0.37 1.5
347,661 - 8510 mRNA_142 0.37 0.4
347,669 + 8510 mRNA_142 0.37 -0.6
347,788 + 8510 mRNA_142 0.38 -1.3
348,162 + 8510 mRNA_142 0.41 -2.7
348,195 - 8510 mRNA_142 0.41 -0.6
348,328 + 8510 mRNA_142 0.42 1.2
348,450 + 8510 mRNA_142 0.43 0.0
348,591 - 8510 mRNA_142 0.44 0.4
348,591 - 8510 mRNA_142 0.44 -0.8
348,724 - 8510 mRNA_142 0.45 0.3
348,744 + 8510 mRNA_142 0.45 -0.1
348,820 + 8510 mRNA_142 0.46 -0.4
348,888 - 8510 mRNA_142 0.46 -0.3
348,903 - 8510 mRNA_142 0.46 -0.1
348,954 - 8510 mRNA_142 0.47 0.4
349,039 - 8510 mRNA_142 0.48 -0.9
349,057 + 8510 mRNA_142 0.48 -0.7
349,099 + 8510 mRNA_142 0.48 -2.1
349,383 - 8510 mRNA_142 0.50 -0.4
349,439 - 8510 mRNA_142 0.51 0.2
349,458 + 8510 mRNA_142 0.51 -0.5
349,528 + 8510 mRNA_142 0.51 -0.5
349,848 - 8510 mRNA_142 0.54 -0.4
349,878 - 8510 mRNA_142 0.54 -1.4
349,932 - 8510 mRNA_142 0.55 0.9
349,936 - 8510 mRNA_142 0.55 2.3
350,006 - 8510 mRNA_142 0.55 -0.1
350,023 + 8510 mRNA_142 0.55 -0.6
350,107 - 8510 mRNA_142 0.56 0.5
350,148 - 8510 mRNA_142 0.56 1.8
350,205 - 8510 mRNA_142 0.57 0.4
350,239 - 8510 mRNA_142 0.57 -2.5
350,350 - 8510 mRNA_142 0.58 -1.1
350,384 + 8510 mRNA_142 0.58 -0.6
350,414 - 8510 mRNA_142 0.58 -1.9
350,501 - 8510 mRNA_142 0.59 -0.8
350,618 + 8510 mRNA_142 0.60 0.5
350,654 - 8510 mRNA_142 0.60 -1.6
350,656 + 8510 mRNA_142 0.60 0.2
350,731 + 8510 mRNA_142 0.61 1.7
350,751 - 8510 mRNA_142 0.61 -1.5
350,778 - 8510 mRNA_142 0.61 1.7
350,818 - 8510 mRNA_142 0.62 0.0
351,055 + 8510 mRNA_142 0.63 1.2
351,081 - 8510 mRNA_142 0.64 -0.0
351,224 - 8510 mRNA_142 0.65 -2.0
351,247 + 8510 mRNA_142 0.65 -0.4
351,295 + 8510 mRNA_142 0.65 -1.2
351,316 + 8510 mRNA_142 0.65 2.5
351,346 - 8510 mRNA_142 0.66 -1.0
351,454 - 8510 mRNA_142 0.67 -2.3
351,516 + 8510 mRNA_142 0.67 0.7
351,574 - 8510 mRNA_142 0.67 -2.1
351,584 - 8510 mRNA_142 0.68 -0.3
351,604 + 8510 mRNA_142 0.68 -0.3
351,640 - 8510 mRNA_142 0.68 -1.7
351,660 + 8510 mRNA_142 0.68 2.2
351,725 + 8510 mRNA_142 0.69 -1.7
351,755 - 8510 mRNA_142 0.69 -1.1
351,796 - 8510 mRNA_142 0.69 -0.1
351,802 + 8510 mRNA_142 0.69 -0.5
351,990 - 8510 mRNA_142 0.71 1.1
352,000 - 8510 mRNA_142 0.71 0.6
352,021 - 8510 mRNA_142 0.71 0.3
352,098 - 8510 mRNA_142 0.72 -1.6
352,103 + 8510 mRNA_142 0.72 1.4
352,106 + 8510 mRNA_142 0.72 0.3
352,120 + 8510 mRNA_142 0.72 0.8
352,153 - 8510 mRNA_142 0.72 0.6
352,299 - 8510 mRNA_142 0.73 -0.6
352,306 + 8510 mRNA_142 0.73 0.0
352,315 + 8510 mRNA_142 0.73 1.7
352,557 - 8510 mRNA_142 0.75 3.1
352,593 - 8510 mRNA_142 0.76 -0.3
352,593 - 8510 mRNA_142 0.76 -0.1
352,809 + 8510 mRNA_142 0.77 1.4
352,867 + 8510 mRNA_142 0.78 -2.1
352,913 - 8510 mRNA_142 0.78 0.6
352,917 + 8510 mRNA_142 0.78 2.2
353,043 - 8510 mRNA_142 0.79 -1.6
353,115 - 8510 mRNA_142 0.80 -0.1
353,198 + 8510 mRNA_142 0.80 1.2
353,310 - 8510 mRNA_142 0.81 0.3
353,375 + 8510 mRNA_142 0.82 1.6
353,607 + 8510 mRNA_142 0.84 0.8
353,613 - 8510 mRNA_142 0.84 -1.5
353,705 + 8510 mRNA_142 0.84 -0.9
353,845 - 8510 mRNA_142 0.85 -0.8
353,855 + 8510 mRNA_142 0.85 -0.9
353,893 - 8510 mRNA_142 0.86 -1.0
353,895 + 8510 mRNA_142 0.86 -0.1
353,899 + 8510 mRNA_142 0.86 0.7
353,949 - 8510 mRNA_142 0.86 -0.7
354,024 + 8510 mRNA_142 0.87 -0.2
354,039 - 8510 mRNA_142 0.87 -1.8
354,076 - 8510 mRNA_142 0.87 -2.8
354,146 + 8510 mRNA_142 0.88 -0.6
354,172 + 8510 mRNA_142 0.88 0.5
354,186 - 8510 mRNA_142 0.88 1.5
354,222 - 8510 mRNA_142 0.88 -1.3
354,230 + 8510 mRNA_142 0.88 0.6
354,482 + -0.5
354,653 - 0.3
354,729 - 0.7
355,099 - 1.7
355,161 - -2.9
355,374 - 1.4
355,403 - 0.1
355,418 - -0.4
355,442 - -0.6
355,531 + -0.4
355,647 + 0.2
355,755 - 0.7
355,785 + 1.7
355,804 + -2.3
356,035 + 1.0
356,179 - 0.2
356,187 - 0.2
356,537 - 8511 mRNA_143 0.21 -0.3
356,609 - 8511 mRNA_143 0.25 2.4
356,663 + 8511 mRNA_143 0.28 0.8
356,682 + 8511 mRNA_143 0.29 -1.0