Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_97

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_96: 8464 - KOG4031 Vesicle coat protein clathrin, light chain, at 228445 to 229589 8464 mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229785 to 233167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233874 to 234659 8466

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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229,618 - 1.2
229,618 + -0.4
229,681 - -0.6
229,688 + -0.2
230,132 + 8465 mRNA_97 0.10 0.0
230,155 - 8465 mRNA_97 0.11 1.0
230,173 + 8465 mRNA_97 0.11 -0.2
230,329 + 8465 mRNA_97 0.16 -0.7
230,399 - 8465 mRNA_97 0.18 1.1
230,575 - 8465 mRNA_97 0.23 1.4
230,744 + 8465 mRNA_97 0.28 -0.8
230,750 - 8465 mRNA_97 0.29 -0.9
231,010 - 8465 mRNA_97 0.36 1.5
231,079 - 8465 mRNA_97 0.38 -1.6
231,190 - 8465 mRNA_97 0.42 -0.5
231,279 - 8465 mRNA_97 0.44 -0.2
231,476 + 8465 mRNA_97 0.50 -0.6
231,641 - 8465 mRNA_97 0.55 0.8
231,800 - 8465 mRNA_97 0.60 -1.0
232,261 + 8465 mRNA_97 0.73 0.9
232,277 - 8465 mRNA_97 0.74 -1.2
232,833 - 0.1
232,980 + 1.6
232,995 - 0.4
233,157 - -1.7
233,237 + -0.5
233,256 - 0.6
233,256 - 1.0
233,263 - -0.6
233,276 + 0.8
233,282 - 0.7
233,290 + -0.6
233,290 + -1.6
233,290 + -0.3
233,298 - -2.1
233,298 + 3.3
233,298 - 0.3
233,301 + 0.9
233,301 - -0.9
233,301 - -1.4
233,302 + -1.0
233,315 + 0.2
233,316 - 0.1
233,316 + -0.1
233,317 - -1.2
233,317 - -1.0
233,319 - -0.2
233,320 - 1.2
233,321 + 1.5
233,321 - -0.2
233,321 - -0.1
233,323 - -1.0
233,323 - 0.7
233,324 + -0.1
233,324 + 0.0
233,325 + -2.0
233,325 - 0.2
233,326 + -2.3
233,329 + 0.1
233,332 + 0.7
233,335 + 1.5
233,336 + -0.6
233,337 + -0.3
233,337 + -0.2
233,350 + -2.2
233,350 + 0.9
233,354 - -1.3
233,359 + 0.1
233,365 - 0.3
233,365 - -1.4
233,365 + 1.4
233,375 - -0.4
233,379 + 0.1
233,383 + -0.5
233,387 - 0.4
233,404 + -0.6
233,404 + -0.0
233,408 - 0.5
233,436 - -1.9
233,436 - 0.2
233,436 - 0.1
233,437 - -0.7
233,441 + 1.8
233,442 - 0.7
233,443 - -0.4
233,444 + -0.4
233,446 - -1.5
233,448 - -1.1
233,450 + 0.7
233,451 + -1.1
233,452 + -1.3
233,459 - 1.4
233,488 - -0.1
233,491 - 1.4
233,507 + 0.0
233,512 - -1.5
233,518 - 0.5
233,520 - -0.8
233,523 + -1.1
233,529 - -1.1
233,539 - -0.9
233,541 + -1.8
233,549 + -1.3
233,551 + 1.2
233,559 - -0.1
233,560 + -0.1
233,568 + -1.6
233,571 - -1.9
233,573 + 2.8
233,613 + -1.6
233,657 - 0.6
233,706 + -0.9
233,726 + -1.7
233,851 - -0.1
233,852 + 0.3
233,859 - -0.1
233,865 + 0.7
234,006 - 8466 mRNA_98 0.17 0.2
234,139 - 8466 mRNA_98 0.34 -0.1